Add reproducible testing infra #45
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added 17 commits
June 18, 2025 10:49
These integrity of these files are needed to check correctness with Dries.
This also exposed a bug in the pathway counting query which is now fixed.
* Set required environment variables in github CI * Move the parse_literal function from submit to abomination * parse_literal now returns None on error
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Use test containers to test SQL queries against gold standard results provided by @savantas code.
Closes #21