Single-Cell-eRNA

Goal: Develop a pipeline for detecting enhancer RNAs in scRNA-seq data

Name		Name	Last commit message	Last commit date
Latest commit History 21 Commits
figures		figures
.gitignore		.gitignore
README.md		README.md
analyze-erna-coverage.ipynb		analyze-erna-coverage.ipynb
bed_from_peaks.ipynb		bed_from_peaks.ipynb
controller.py		controller.py
hg38.rds		hg38.rds
label-da-bed.r		label-da-bed.r
label-transfer-da-notebook.ipynb		label-transfer-da-notebook.ipynb
main.py		main.py
notebook.nb.html		notebook.nb.html
notebook.rmd		notebook.rmd
sample-summary.csv		sample-summary.csv
sc_erna.yml		sc_erna.yml