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Merged
jkanche merged 2 commits into from
Dec 30, 2025
+169 −225
Merged

Classes extend BiocObject, update tests #70

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68b2983
Classes extend BiocObject, update tests
jkanche Dec 30, 2025
17b6736
rename iranges class to base
jkanche Dec 30, 2025
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2 changes: 1 addition & 1 deletion .github/workflows/publish-pypi.yml
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Expand Up @@ -23,7 +23,7 @@ jobs:
uses: pypa/cibuildwheel@v2.22.0
env:
CIBW_ARCHS_LINUX: x86_64
CIBW_PROJECT_REQUIRES_PYTHON: ">=3.9"
CIBW_PROJECT_REQUIRES_PYTHON: ">=3.10"
CIBW_SKIP: pp*

- uses: actions/upload-artifact@v4
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5 changes: 5 additions & 0 deletions CHANGELOG.md
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@@ -1,5 +1,10 @@
# Changelog

## Version 0.7.0

- Classes extend `BiocObject` from biocutils.
- `validate` param in the constructor is renamed to `_validate`.

## Version 0.6.0

- Implement `CompressedIRangesList` extending the base compressed-lists class
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4 changes: 2 additions & 2 deletions setup.cfg
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Expand Up @@ -49,10 +49,10 @@ python_requires = >=3.9
# For more information, check out https://semver.org/.
install_requires =
importlib-metadata; python_version<"3.8"
biocutils>=0.2.1
biocutils>=0.3.1
biocframe>=0.6.2
numpy
compressed_lists
compressed_lists>=0.4.0

[options.packages.find]
where = src
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2 changes: 1 addition & 1 deletion src/iranges/__init__.py
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Expand Up @@ -15,6 +15,6 @@
finally:
del version, PackageNotFoundError

from .IRanges import IRanges
from .base import IRanges
from .utils import normalize_array
from .irangeslist import CompressedIRangesList
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