Plasmaag does not support MacOS #2
Description
At the moment PLASMAAG does not work on MacOS but only on linux, this is due to some utility functions eg. zcat working differently between the two systems eg. zcat (eg. see https://serverfault.com/questions/570024/zcat-gzcat-works-in-linux-not-on-osx-general-linux-osx-compatibility).
Likely fix is:
- Depend on conda environments always building the correct util tools.
- Make sure not to use tools which differ between the systems
Having PLASMAAG work on MacOS is likely not relevant for running the tool for general use as it would often be used on a HPC system, nonetheless people might want to testrun the tool locally and here it is a problem if it does not work on MacOS.