Skip to content

Exporting corrected count matrix instead of scaled data #4

@Yolanda-HT

Description

@Yolanda-HT
  • Randomly version: 0.1.0
  • Python version: 3.6.3
  • Operating System: Linux x86_64

Description

The output from Randomly has mean of ~ 0 for each gene (preprocess step centered data around zero after log2(1+TPM) transformation and filter). I am wondering if it is possible to add additional function to export a matrix that mimics a count matrix (some of the downstream packages I am using prefer to use count matrix as input.)

Thank you!

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions