Skip to content

BED parser dropping a line #86

@VJalili

Description

@VJalili

Fails to read the following line:

chr1    MSPC_PEAK    .    15    25    EEE    20

when the parser configuration is:

{  
   "DropPeakIfInvalidValue":false,
   "DefaultValue":12.0,
   "PValueFormat":1,
   "Name":1,
   "Value":5,
   "Summit":6,
   "Chr":0,
   "Left":3,
   "Right":4,
   "Strand":2
}

And the messages contain:

Default p-value used for 1 times
1 Lines dropped
Line 1\t:\tInvalid p-value (12)

Metadata

Metadata

Assignees

No one assigned

    Labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions